ProteomeXchange fully supports both MS/MS proteomics and SRM data submissions. Submissions of other types of proteomics data is also possible using the Partial Submission mechanism.
PRIDE - PRoteomics IDEntifications Database
PRIDE accepts both
For detailed information, please consult the following documents
PeptideAtlas - PASSEL
SRM/MRM data can be submitted to PASSEL.
Shotgun proteomics data can be submitted to MassIVE.
Data submission documentation is available at jPost Help Page.